Mechanisims of nuclear self-assembly
The project aims to create synthetic nuclei ('Organelloids') to study the self-assembly mechanisms of the nuclear envelope, enhancing understanding of nuclear function and its implications for diseases.
Projectdetails
Introduction
Shape and function of the vertebrate nucleus depend on the choreographed interplay between lipids, proteins, and DNA to form the nuclear envelope. Even small molecular changes, such as point mutations in the proteins of the nuclear envelope (the lamina), cause detrimental human diseases including premature aging, cancer, and heart disease.
To date, a clear, mechanistically compelling explanation for the dynamic coupling of lipids, proteins, and DNA to safeguard nuclear shape and function is still missing. We here propose to build minimal, synthetic nuclei (‘Organelloids’) bottom-up as a tool to study the self-assembly of a functional nucleus.
Recent Discoveries
We recently discovered the conserved molecular machinery that ensures the assembly of the nuclear envelope in open vertebrate mitosis. Our data point to uncharacterized fundamental mechanisms that couple the following processes:
- The fusion of lipid-membrane sheets into a continuous nuclear membrane.
- The formation of the lamina.
- The organization of chromatin in the same chain of events.
Proposal Overview
In this proposal, we will leverage our recent advances in reconstitution to build ‘Organelloids’ to recapitulate the shape and function of the membrane-lamina-chromatin confluence.
Using these nuclear Organelloids, we will resolve the nuclear assembly process in high resolution by applying integrated structural biology and determine the unknown biophysical principles that drive the self-organization of individual molecules into one functional organelle.
Goals and Implications
Our strategy will reveal the unknown hierarchical relationship between lipids, proteins, and DNA and produce detailed mechanistic models for the formation and coupling of functional subdomains that are commonly observed in the nuclear membrane, the lamina, and chromatin.
With cell models and top-down approaches, we ultimately aim to define the fundamental principles that govern nuclear biogenesis with implications for health and disease.
Financiële details & Tijdlijn
Financiële details
Subsidiebedrag | € 1.499.974 |
Totale projectbegroting | € 1.499.974 |
Tijdlijn
Startdatum | 1-1-2024 |
Einddatum | 31-12-2028 |
Subsidiejaar | 2024 |
Partners & Locaties
Projectpartners
- MAX-PLANCK-GESELLSCHAFT ZUR FORDERUNG DER WISSENSCHAFTEN EVpenvoerder
Land(en)
Vergelijkbare projecten binnen European Research Council
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Reshaping the nucleome to reveal its gene- and mechano-regulatory function
The RENOME project aims to develop tools for real-time study and reengineering of chromatin organization to connect nuclear mechanics with cellular behavior and inform future epigenetic therapies.
The geometrical and physical basis of cell-like functionality
The project aims to uncover mechanistic principles for building life-like systems from minimal components using theoretical modeling and in-silico evolution to explore protein patterns and membrane dynamics.
Understanding emergent physical properties of chromatin using synthetic nuclei
This project aims to bridge in vitro and cellular studies to elucidate how molecular activities of chromatin influence its material properties and nuclear organization through innovative experimental methods.
Recreating molecular memories: imaging the mechanics of chromosome assembly and the birth of cell identity
This project aims to uncover the molecular mechanisms of histone deposition during DNA replication to enhance understanding of epigenetic memory transmission and chromosome assembly.
Uncovering the role and regulation of 3D DNA-RNA nuclear dynamics in controlling cell fate decisions
This project aims to elucidate the interplay between 3D genome organization and transcriptome dynamics in early mouse embryos to identify factors influencing cell fate decisions.